Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS27355 | Not Available | Positive | 4971806 - 4972111 | 11494.5 |
| hypothetical protein | EBF16_RS27360 | Not Available | Positive | 4972143 - 4972820 | 25514.5 |
| Major capsid protein | EBF16_RS27365 | Not Available | Positive | 4973154 - 4974365 | 43048.0 |
| Prohead protease | EBF16_RS27370 | Not Available | Positive | 4974365 - 4974901 | 19554.3 |
| Portal protein | EBF16_RS27375 | Not Available | Positive | 4974916 - 4976088 | 42339.2 |
| head-tail connector protein | EBF16_RS27380 | Not Available | Positive | 4976081 - 4976350 | 9708.75 |
| hypothetical protein | EBF16_RS29015 | Not Available | Positive | 4976389 - 4976550 | 5954.92 |
| Integrase | EBF16_RS27385 | Not Available | Positive | 4976547 - 4977626 | 40336.5 |
| Trna-arg; | Not Available | Not Available | Positive | 4977636 - 4977712 | Not Available |
| Hypothetical protein | EBF16_RS27395 | Not Available | Positive | 4977800 - 4978519 | 26348.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
