Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Isbm1, transposase orfb | EBF16_RS27105 | Not Available | Negative | 4920474 - 4921082 | 22792.5 |
| Transposase | EBF16_RS29510 | Not Available | Negative | 4920986 - 4921255 | 10522.5 |
| hypothetical protein | EBF16_RS27110 | Not Available | Negative | 4921558 - 4921737 | 6461.78 |
| Transposase/is protein | EBF16_RS27115 | Not Available | Negative | 4921809 - 4922009 | 7565.96 |
| hypothetical protein | EBF16_RS27120 | Not Available | Negative | 4922535 - 4923590 | 38424.1 |
| Putative nucleoid-associated protein | EBF16_RS27125 | Not Available | Positive | 4924050 - 4925054 | 37204.4 |
| Attl | Not Available | Not Available | Positive | 4954380 - 4954393 | Not Available |
| Portal protein | EBF16_RS27340 | Not Available | Positive | 4968865 - 4970532 | 61018.0 |
| hypothetical protein | EBF16_RS29010 | Not Available | Negative | 4970534 - 4971052 | 19679.8 |
| hypothetical protein | EBF16_RS27350 | Not Available | Positive | 4971327 - 4971809 | 18078.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
