Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Transposase/is protein | EBF16_RS27060 | Not Available | Positive | 4913693 - 4914358 | 24645.8 |
| Is1480 transposase | EBF16_RS27065 | Not Available | Positive | 4914552 - 4915364 | 30636.9 |
| class i sam-dependent methyltransferase | EBF16_RS27070 | Not Available | Positive | 4915589 - 4916320 | 27850.4 |
| hypothetical protein | EBF16_RS27075 | Not Available | Positive | 4916411 - 4917088 | 23431.2 |
| Is5 family transposase orfb | EBF16_RS27080 | Not Available | Positive | 4917153 - 4917461 | 12034.7 |
| Tail sheath protein | EBF16_RS27085 | Not Available | Negative | 4917429 - 4918148 | 24789.2 |
| Baseplate assembly protein | EBF16_RS27090 | Not Available | Negative | 4918163 - 4918513 | 12385.3 |
| Baseplate assembly protein | EBF16_RS27095 | Not Available | Negative | 4918513 - 4918893 | 12306.3 |
| phage baseplate assembly protein v | EBF16_RS29505 | Not Available | Negative | 4918925 - 4919071 | 5291.05 |
| sulfotransferase domain-containing protein | EBF16_RS27100 | Not Available | Positive | 4919137 - 4920408 | 46767.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
