Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS26545 | Not Available | Negative | 4813981 - 4814223 | 8461.73 |
| Major capsid protein | EBF16_RS26550 | Not Available | Negative | 4814279 - 4815535 | 44411.8 |
| Atp-dependent clp endopeptidase proteolytic subunit | EBF16_RS26555 | Not Available | Negative | 4815547 - 4816299 | 26416.3 |
| Portal protein | EBF16_RS26560 | Not Available | Negative | 4816412 - 4817722 | 47915.5 |
| Portal protein | EBF16_RS26565 | Not Available | Negative | 4817731 - 4819248 | 54566.9 |
| Terminase small subunit | EBF16_RS26570 | Not Available | Negative | 4819245 - 4819715 | 17028.2 |
| Putative class i holin | EBF16_RS26575 | Not Available | Negative | 4819804 - 4820163 | 12887.0 |
| hypothetical protein | EBF16_RS26580 | Not Available | Negative | 4820260 - 4820607 | 12603.5 |
| hypothetical protein | EBF16_RS26585 | Not Available | Negative | 4820816 - 4821859 | 39233.2 |
| hypothetical protein | EBF16_RS26590 | Not Available | Negative | 4821889 - 4822386 | 18014.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
