Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| head-tail connector protein | EBF16_RS16355 | Not Available | Negative | 2665358 - 2665927 | 19792.9 |
| hypothetical protein | EBF16_RS29380 | Not Available | Negative | 2665946 - 2666275 | 11092.1 |
| Major capsid protein gp5 | EBF16_RS16365 | Not Available | Negative | 2666342 - 2667571 | 43869.6 |
| Capsid maturation protease | EBF16_RS16370 | Not Available | Negative | 2667640 - 2668401 | 27236.8 |
| Portal protein gp3 | EBF16_RS16375 | Not Available | Negative | 2668382 - 2669665 | 47577.8 |
| Terminase large subunit | EBF16_RS16380 | Not Available | Negative | 2669662 - 2671398 | 65409.2 |
| Terminase small subunit | EBF16_RS16385 | Not Available | Negative | 2671400 - 2672047 | 23975.6 |
| Putative endonuclease | EBF16_RS16390 | Not Available | Negative | 2672196 - 2672588 | 14370.1 |
| hypothetical protein | EBF16_RS16395 | Not Available | Negative | 2672929 - 2673372 | 16779.3 |
| Dna primase | EBF16_RS16400 | Not Available | Negative | 2673609 - 2676842 | 118642.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
