Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| jab domain-containing protein | EBF16_RS05625 | Not Available | Negative | 340735 - 341010 | 10326.5 |
| Putative thymidylate synthase | EBF16_RS05630 | Not Available | Positive | 341215 - 342150 | 35411.0 |
| Attl | Not Available | Not Available | Positive | 2185049 - 2185063 | Not Available |
| Isxac3 transposase | EBF16_RS14030 | Not Available | Positive | 2193581 - 2193817 | 9138.95 |
| is110 family transposase | EBF16_RS14035 | Not Available | Positive | 2194043 - 2195401 | 49965.3 |
| Is3 transposase b | EBF16_RS14040 | Not Available | Positive | 2195402 - 2196292 | 34467.4 |
| Is30 transposase | EBF16_RS14045 | Not Available | Negative | 2196398 - 2197018 | 23568.0 |
| Transposase | EBF16_RS14050 | Not Available | Negative | 2197059 - 2198282 | 45801.1 |
| Is30 transposase | EBF16_RS14055 | Not Available | Negative | 2198174 - 2198809 | 23262.9 |
| rna 2',3'-cyclic phosphodiesterase | EBF16_RS14060 | Not Available | Positive | 2199212 - 2199769 | 20239.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
