Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Sialidase domain-containing/calx-like domain superfamily protein | EBF16_RS05435 | Not Available | Negative | 313810 - 316530 | 97002.8 |
| Putative tail fiber protein | EBF16_RS05440 | Not Available | Negative | 316586 - 317230 | 22422.6 |
| Hypothetical protein | EBF16_RS28465 | Not Available | Negative | 317319 - 317915 | 22067.4 |
| Virion associated protein | EBF16_RS05450 | Not Available | Negative | 317915 - 318628 | 26330.9 |
| Hypothetical protein | EBF16_RS05455 | Not Available | Negative | 318633 - 319382 | 26131.3 |
| Virion associated protein | EBF16_RS05460 | Not Available | Negative | 319447 - 319890 | 14948.9 |
| Major capsid protein | EBF16_RS05465 | Not Available | Negative | 319903 - 321003 | 40437.7 |
| Carbon storage regulator | EBF16_RS05470 | Not Available | Negative | 321096 - 321269 | 6108.68 |
| Hypothetical protein | EBF16_RS05475 | Not Available | Negative | 321301 - 322227 | 33135.0 |
| Portal protein | EBF16_RS05480 | Not Available | Negative | 322253 - 324574 | 86870.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
