Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| accessory factor ubik family protein | EBF16_RS28230 | Not Available | Positive | 5152878 - 5153189 | 11158.1 |
| ybjn domain-containing protein | EBF16_RS28235 | Not Available | Positive | 5153232 - 5153738 | 18824.0 |
| pyrroline-5-carboxylate reductase family protein | EBF16_RS28240 | Not Available | Positive | 5153762 - 5154577 | 27808.0 |
| asparaginase domain-containing protein | EBF16_RS28245 | Not Available | Positive | 5154640 - 5155143 | 17997.8 |
| hypothetical protein | EBF16_RS28250 | Not Available | Positive | 5155225 - 5155470 | 8152.57 |
| pyridoxal phosphate-dependent aminotransferase | EBF16_RS28255 | Not Available | Negative | 5155509 - 5156666 | 41416.9 |
| card family transcriptional regulator | EBF16_RS28260 | Not Available | Negative | 5156812 - 5157339 | 19871.9 |
| ferredoxin fdxa | EBF16_RS28265 | Not Available | Negative | 5157586 - 5157924 | 12409.5 |
| ompa family protein | EBF16_RS28270 | Not Available | Negative | 5158085 - 5158765 | 23981.3 |
| hemolysin family protein | EBF16_RS28275 | Not Available | Positive | 5158913 - 5160229 | 47658.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
