Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1178 family protein | EBF16_RS28080 | Not Available | Positive | 5117344 - 5117835 | 17238.4 |
| Trna-arg | Not Available | Not Available | Positive | 5117872 - 5117948 | Not Available |
| tonb-dependent receptor domain-containing protein | EBF16_RS28090 | Not Available | Positive | 5118234 - 5121326 | 111948.0 |
| 2og-fe(ii) oxygenase | EBF16_RS28095 | Not Available | Positive | 5121394 - 5122362 | 34746.6 |
| hypothetical protein | EBF16_RS28100 | Not Available | Negative | 5122431 - 5123330 | 33465.6 |
| glycosyltransferase | EBF16_RS28105 | Not Available | Negative | 5123327 - 5125198 | 67845.5 |
| cellulose biosynthesis cyclic di-gmp-binding regulatory protein bcsb | EBF16_RS28110 | Not Available | Negative | 5125198 - 5126787 | 57102.0 |
| nad-dependent epimerase/dehydratase family protein | EBF16_RS28115 | Not Available | Negative | 5126784 - 5128034 | 46000.8 |
| ycii family protein | EBF16_RS28120 | Not Available | Negative | 5128207 - 5128557 | 12792.4 |
| hd-gyp domain-containing protein | EBF16_RS28125 | Not Available | Positive | 5128806 - 5130092 | 47751.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
