Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diacylglycerol/lipid kinase family protein | EBF16_RS28030 | Not Available | Negative | 5106954 - 5107847 | 32313.0 |
| metallophosphoesterase family protein | EBF16_RS28035 | Not Available | Positive | 5107917 - 5108795 | 32370.7 |
| diguanylate cyclase | EBF16_RS28040 | Not Available | Positive | 5108962 - 5110743 | 64534.6 |
| lysr family transcriptional regulator | EBF16_RS28045 | Not Available | Negative | 5110929 - 5111804 | 31707.8 |
| aec family transporter | EBF16_RS28050 | Not Available | Positive | 5111902 - 5112831 | 32043.6 |
| eal domain-containing protein | EBF16_RS28055 | Not Available | Positive | 5112961 - 5114538 | 57818.5 |
| class i sam-dependent methyltransferase | EBF16_RS28060 | Not Available | Negative | 5114542 - 5115402 | 30282.4 |
| comf family protein | EBF16_RS28065 | Not Available | Positive | 5115444 - 5116202 | 27145.6 |
| glutaredoxin 3 | EBF16_RS28070 | Not Available | Positive | 5116253 - 5116510 | 9323.2 |
| carbon-nitrogen hydrolase family protein | EBF16_RS28075 | Not Available | Positive | 5116517 - 5117347 | 30016.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
