Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-dependent thiol peroxidase | EBF16_RS27935 | Not Available | Positive | 5090188 - 5090649 | 16295.6 |
| ferritin-like domain-containing protein | EBF16_RS27940 | Not Available | Positive | 5090646 - 5091455 | 29543.7 |
| m23 family metallopeptidase | EBF16_RS27945 | Not Available | Positive | 5091565 - 5092293 | 25400.4 |
| iron-sulfur cluster insertion protein erpa | EBF16_RS27950 | Not Available | Positive | 5092376 - 5092702 | 10903.9 |
| exodeoxyribonuclease iii | EBF16_RS27955 | Not Available | Positive | 5092774 - 5093550 | 29296.6 |
| duf2239 family protein | EBF16_RS27960 | Not Available | Positive | 5093618 - 5094145 | 18836.2 |
| ydei/ompd-associated family protein | EBF16_RS27965 | Not Available | Positive | 5094176 - 5094487 | 11654.0 |
| hypothetical protein | EBF16_RS27970 | Not Available | Positive | 5094831 - 5095064 | 8696.89 |
| hypothetical protein | EBF16_RS29020 | Not Available | Negative | 5095233 - 5095808 | 20882.9 |
| bestrophin family protein | EBF16_RS27980 | Not Available | Negative | 5096231 - 5097115 | 32829.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
