Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| csbd family protein | EBF16_RS27835 | Not Available | Positive | 5070573 - 5070755 | 6012.14 |
| alanine/glycine:cation symporter family protein | EBF16_RS27840 | Not Available | Negative | 5070914 - 5072281 | 47825.3 |
| phosphoglucosamine mutase | EBF16_RS27845 | Not Available | Positive | 5072375 - 5073715 | 47399.8 |
| duf1272 domain-containing protein | EBF16_RS27850 | Not Available | Positive | 5073715 - 5073939 | 8080.58 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | EBF16_RS27855 | Not Available | Positive | 5073936 - 5074823 | 30166.2 |
| ribonuclease hii | EBF16_RS27860 | Not Available | Positive | 5074816 - 5075415 | 21414.9 |
| l,d-transpeptidase family protein | EBF16_RS27865 | Not Available | Positive | 5075495 - 5076133 | 22687.7 |
| apc family permease | EBF16_RS27870 | Not Available | Negative | 5076138 - 5077559 | 49678.8 |
| hypothetical protein | EBF16_RS27875 | Not Available | Positive | 5077725 - 5078300 | 19599.5 |
| tigr03619 family f420-dependent llm class oxidoreductase | EBF16_RS27880 | Not Available | Negative | 5078297 - 5079211 | 32574.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
