Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS27635 | Not Available | Positive | 5025020 - 5025466 | 16111.5 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | EBF16_RS27640 | Not Available | Negative | 5025463 - 5026092 | 22048.1 |
| ribonuclease ph | EBF16_RS27645 | Not Available | Negative | 5026217 - 5026933 | 25494.5 |
| duf6438 domain-containing protein | EBF16_RS27650 | Not Available | Positive | 5027030 - 5027557 | 18777.8 |
| hypothetical protein | EBF16_RS27655 | Not Available | Negative | 5028045 - 5029415 | 51558.1 |
| heat-inducible transcriptional repressor hrca | EBF16_RS27660 | Not Available | Positive | 5029834 - 5030877 | 36992.7 |
| nucleotide exchange factor grpe | EBF16_RS27665 | Not Available | Positive | 5030874 - 5031437 | 20399.0 |
| threonine synthase | EBF16_RS27670 | Not Available | Positive | 5031525 - 5032766 | 44582.7 |
| tonb-dependent receptor | EBF16_RS27675 | Not Available | Negative | 5032805 - 5034994 | 78162.8 |
| padr family transcriptional regulator | EBF16_RS27680 | Not Available | Positive | 5035290 - 5035958 | 23446.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
