Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | EBF16_RS27585 | Not Available | Positive | 5017584 - 5018177 | 21445.5 |
| duf1476 domain-containing protein | EBF16_RS27590 | Not Available | Positive | 5018235 - 5018558 | 12156.3 |
| bola/ibag family iron-sulfur metabolism protein | EBF16_RS27595 | Not Available | Positive | 5018572 - 5018805 | 8085.75 |
| grx4 family monothiol glutaredoxin | EBF16_RS27600 | Not Available | Positive | 5018870 - 5019202 | 12057.4 |
| blai/meci/copy family transcriptional regulator | EBF16_RS27605 | Not Available | Positive | 5019637 - 5020005 | 13547.1 |
| m56 family metallopeptidase | EBF16_RS27610 | Not Available | Positive | 5020002 - 5021600 | 57303.7 |
| radical sam family heme chaperone hemw | EBF16_RS27615 | Not Available | Negative | 5021607 - 5022782 | 42387.4 |
| cap domain-containing protein | EBF16_RS27620 | Not Available | Positive | 5022835 - 5023410 | 21589.3 |
| hypothetical protein | EBF16_RS27625 | Not Available | Positive | 5023526 - 5024257 | 25071.2 |
| cap domain-containing protein | EBF16_RS27630 | Not Available | Positive | 5024392 - 5025012 | 22835.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
