Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s10 family peptidase | EBF16_RS27535 | Not Available | Negative | 5002797 - 5004311 | 54990.7 |
| mfs transporter | EBF16_RS27540 | Not Available | Negative | 5004378 - 5005676 | 44412.1 |
| helix-turn-helix domain-containing protein | EBF16_RS27545 | Not Available | Negative | 5005805 - 5007202 | 51088.1 |
| isocitrate lyase | EBF16_RS27550 | Not Available | Positive | 5007350 - 5008942 | 58506.3 |
| duf885 domain-containing protein | EBF16_RS27555 | Not Available | Negative | 5009294 - 5011102 | 65707.0 |
| low molecular weight protein tyrosine phosphatase family protein | EBF16_RS27560 | Not Available | Negative | 5011543 - 5011893 | 13333.0 |
| gh92 family glycosyl hydrolase | EBF16_RS27565 | Not Available | Negative | 5011890 - 5014265 | 85984.3 |
| glutamine amidotransferase | EBF16_RS27570 | Not Available | Positive | 5014381 - 5015082 | 25239.2 |
| glutathione s-transferase family protein | EBF16_RS27575 | Not Available | Positive | 5015237 - 5015923 | 25286.1 |
| 3-isopropylmalate dehydratase large subunit | EBF16_RS27580 | Not Available | Positive | 5016023 - 5017474 | 51460.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
