Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1289 domain-containing protein | EBF16_RS27215 | Not Available | Positive | 4943878 - 4944087 | 7953.4 |
| hypothetical protein | EBF16_RS27220 | Not Available | Negative | 4944138 - 4944473 | 12363.7 |
| is3 family transposase | EBF16_RS27225 | Not Available | Negative | 4944653 - 4945881 | 46455.5 |
| reverse transcriptase domain-containing protein | EBF16_RS27230 | Not Available | Positive | 4946146 - 4947696 | 56816.6 |
| duf6771 family protein | EBF16_RS29695 | Not Available | Negative | 4948009 - 4948200 | 7158.71 |
| hypothetical protein | EBF16_RS27240 | Not Available | Negative | 4948348 - 4948638 | 10410.4 |
| hypothetical protein | EBF16_RS27245 | Not Available | Negative | 4948746 - 4949711 | 34431.7 |
| hypothetical protein | EBF16_RS27250 | Not Available | Negative | 4950222 - 4950440 | 8061.78 |
| hypothetical protein | EBF16_RS27255 | Not Available | Positive | 4950693 - 4950872 | 6567.06 |
| tniq family protein | EBF16_RS27260 | Not Available | Negative | 4950869 - 4952719 | 67412.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
