Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase subunit c | EBF16_RS26340 | Not Available | Negative | 4775905 - 4776468 | 20669.6 |
| transcriptional regulator beti | EBF16_RS26345 | Not Available | Negative | 4776603 - 4777205 | 21202.3 |
| hypothetical protein | EBF16_RS26350 | Not Available | Positive | 4777376 - 4777858 | 16800.8 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | EBF16_RS26360 | Not Available | Negative | 4778629 - 4779483 | 30503.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EBF16_RS26365 | Not Available | Negative | 4779473 - 4780498 | 35211.7 |
| peptidylprolyl isomerase | EBF16_RS26370 | Not Available | Negative | 4780476 - 4781840 | 49431.7 |
| lps-assembly protein lptd | EBF16_RS26375 | Not Available | Negative | 4781927 - 4784191 | 83301.0 |
| leucyl aminopeptidase | EBF16_RS26380 | Not Available | Positive | 4784371 - 4785816 | 49903.9 |
| dna polymerase iii subunit chi | EBF16_RS26385 | Not Available | Positive | 4785822 - 4786259 | 15810.7 |
| nucleoside-diphosphate kinase | EBF16_RS26390 | Not Available | Positive | 4786373 - 4786795 | 15314.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
