Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad:protein fmn transferase | EBF16_RS26040 | Not Available | Negative | 4706792 - 4707661 | 30371.5 |
| duf4198 domain-containing protein | EBF16_RS26045 | Not Available | Negative | 4707772 - 4708662 | 30767.7 |
| duf2271 domain-containing protein | EBF16_RS26050 | Not Available | Negative | 4708678 - 4709220 | 18822.8 |
| pepsy-associated tm helix domain-containing protein | EBF16_RS26055 | Not Available | Negative | 4709238 - 4709882 | 23234.2 |
| vacj family lipoprotein | EBF16_RS26060 | Not Available | Positive | 4710192 - 4711313 | 39175.2 |
| nad-glutamate dehydrogenase | EBF16_RS26065 | Not Available | Negative | 4711420 - 4716081 | 167080.0 |
| hypothetical protein | EBF16_RS26070 | Not Available | Negative | 4716410 - 4717684 | 46060.2 |
| Trna-thr | Not Available | Not Available | Positive | 4717889 - 4717964 | Not Available |
| tyrosine-type recombinase/integrase | EBF16_RS26080 | Not Available | Positive | 4718129 - 4719349 | 46971.9 |
| mbca/pars/xre antitoxin family protein | EBF16_RS26085 | Not Available | Positive | 4719575 - 4719988 | 15399.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
