Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase-like activity of phytase family protein | EBF16_RS25990 | Not Available | Negative | 4695337 - 4696320 | 36341.6 |
| glycine zipper 2tm domain-containing protein | EBF16_RS25995 | Not Available | Positive | 4696504 - 4696929 | 15012.7 |
| hypothetical protein | EBF16_RS26000 | Not Available | Negative | 4696987 - 4697220 | 7382.65 |
| hypothetical protein | EBF16_RS26005 | Not Available | Negative | 4697305 - 4697523 | 6803.73 |
| arsr/smtb family transcription factor | EBF16_RS26010 | Not Available | Positive | 4697737 - 4698708 | 35616.8 |
| methylenetetrahydrofolate reductase | EBF16_RS26015 | Not Available | Positive | 4698705 - 4699637 | 33855.0 |
| homocysteine s-methyltransferase family protein | EBF16_RS26020 | Not Available | Positive | 4699634 - 4700680 | 37432.7 |
| methionine synthase | EBF16_RS26025 | Not Available | Positive | 4700797 - 4703409 | 95714.9 |
| semisweet family transporter | EBF16_RS26030 | Not Available | Positive | 4703552 - 4703821 | 9857.22 |
| pepsy domain-containing protein | EBF16_RS26035 | Not Available | Positive | 4703903 - 4706461 | 92792.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
