Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix transcriptional regulator | EBF16_RS25940 | Not Available | Positive | 4687218 - 4687700 | 17977.9 |
| sensor histidine kinase | EBF16_RS25945 | Not Available | Positive | 4687756 - 4688862 | 40546.0 |
| lytr/algr family response regulator transcription factor | EBF16_RS25950 | Not Available | Positive | 4688859 - 4689662 | 30413.5 |
| sdr family oxidoreductase | EBF16_RS25955 | Not Available | Negative | 4689743 - 4690474 | 25753.9 |
| arac family transcriptional regulator | EBF16_RS25960 | Not Available | Positive | 4690664 - 4691557 | 32392.6 |
| gtra family protein | EBF16_RS25965 | Not Available | Negative | 4691576 - 4691992 | 15420.0 |
| hypothetical protein | EBF16_RS25970 | Not Available | Positive | 4692037 - 4693950 | 70492.2 |
| nucleoside deaminase | EBF16_RS25975 | Not Available | Negative | 4693912 - 4694370 | 16356.7 |
| hypothetical protein | EBF16_RS25980 | Not Available | Negative | 4694488 - 4694709 | 7747.6 |
| 50s ribosomal protein l28 | EBF16_RS25985 | Not Available | Positive | 4694863 - 4695156 | 10757.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
