Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease t2 family protein | EBF16_RS25890 | Not Available | Positive | 4676949 - 4677656 | 26108.5 |
| duf4112 domain-containing protein | EBF16_RS25895 | Not Available | Negative | 4677799 - 4678221 | 15488.0 |
| abc transporter substrate-binding protein | EBF16_RS25900 | Not Available | Negative | 4678287 - 4679795 | 53651.1 |
| porin | EBF16_RS25905 | Not Available | Positive | 4679939 - 4681378 | 52404.5 |
| carboxylesterase/lipase family protein | EBF16_RS25910 | Not Available | Negative | 4681394 - 4682815 | 48833.5 |
| 50s ribosomal protein l7/l12 | EBF16_RS25915 | Not Available | Negative | 4682985 - 4683359 | 12551.0 |
| 50s ribosomal protein l10 | EBF16_RS25920 | Not Available | Negative | 4683432 - 4683947 | 17751.6 |
| type ii toxin-antitoxin system rele/pare family toxin | EBF16_RS25925 | Not Available | Positive | 4684326 - 4684610 | 10505.8 |
| addiction module antidote protein | EBF16_RS25930 | Not Available | Positive | 4684645 - 4684932 | 10150.5 |
| rela/spot family protein | EBF16_RS25935 | Not Available | Negative | 4684991 - 4687096 | 79066.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
