Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione synthase | EBF16_RS25840 | Not Available | Positive | 4666493 - 4667467 | 35195.5 |
| deda family protein | EBF16_RS25845 | Not Available | Positive | 4667629 - 4668228 | 22507.2 |
| hypothetical protein | EBF16_RS25850 | Not Available | Negative | 4668368 - 4668661 | 10552.8 |
| tyrosine recombinase xerc | EBF16_RS25855 | Not Available | Negative | 4668736 - 4669626 | 32191.9 |
| mbl fold metallo-hydrolase | EBF16_RS25860 | Not Available | Positive | 4669899 - 4670777 | 31281.5 |
| duf4230 domain-containing protein | EBF16_RS25865 | Not Available | Positive | 4670762 - 4671475 | 25666.6 |
| quinolinate synthase nada | EBF16_RS25870 | Not Available | Positive | 4671520 - 4672506 | 35937.3 |
| cardiolipin synthase | EBF16_RS25875 | Not Available | Positive | 4672531 - 4673946 | 52502.1 |
| prolyl oligopeptidase family serine peptidase | EBF16_RS25880 | Not Available | Positive | 4673979 - 4676105 | 76609.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | EBF16_RS25885 | Not Available | Positive | 4676102 - 4676956 | 29699.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
