Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle-docking protein ftsy | EBF16_RS25790 | Not Available | Negative | 4655718 - 4656656 | 33478.5 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | EBF16_RS25795 | Not Available | Negative | 4656656 - 4657897 | 44638.7 |
| diaminopimelate epimerase | EBF16_RS25800 | Not Available | Negative | 4657900 - 4658712 | 28651.3 |
| threonine/serine dehydratase | EBF16_RS25805 | Not Available | Negative | 4658753 - 4659745 | 33429.9 |
| tonb-dependent receptor plug domain-containing protein | EBF16_RS25810 | Not Available | Positive | 4660299 - 4662143 | 65555.9 |
| feccd family abc transporter permease | EBF16_RS25815 | Not Available | Positive | 4662130 - 4663134 | 33920.3 |
| abc transporter atp-binding protein | EBF16_RS25820 | Not Available | Positive | 4663128 - 4663901 | 26695.0 |
| penicillin-binding protein activator | EBF16_RS25825 | Not Available | Negative | 4663938 - 4665098 | 40221.2 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | EBF16_RS25830 | Not Available | Positive | 4665155 - 4666012 | 30055.1 |
| yran family protein | EBF16_RS25835 | Not Available | Positive | 4666009 - 4666362 | 13203.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
