Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tpm domain-containing protein | EBF16_RS25690 | Not Available | Negative | 4639043 - 4639843 | 27165.5 |
| lema family protein | EBF16_RS25695 | Not Available | Negative | 4639854 - 4640456 | 21434.6 |
| large conductance mechanosensitive channel protein mscl | EBF16_RS25700 | Not Available | Positive | 4640558 - 4640992 | 15570.3 |
| hypothetical protein | EBF16_RS25705 | Not Available | Positive | 4641136 - 4641408 | 9371.63 |
| chemotaxis protein chea | EBF16_RS25710 | Not Available | Positive | 4641545 - 4643914 | 84907.7 |
| chemotaxis protein chew | EBF16_RS25715 | Not Available | Positive | 4643926 - 4644363 | 15068.4 |
| response regulator | EBF16_RS25720 | Not Available | Positive | 4644448 - 4644813 | 13280.2 |
| chemotaxis protein cheb | EBF16_RS25725 | Not Available | Positive | 4644878 - 4645972 | 37447.4 |
| cher family methyltransferase | EBF16_RS25730 | Not Available | Positive | 4645972 - 4646841 | 32394.6 |
| n-acetylmuramoyl-l-alanine amidase | EBF16_RS25735 | Not Available | Positive | 4646979 - 4647677 | 25981.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
