Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsule biosynthesis protein | EBF16_RS25640 | Not Available | Positive | 4629534 - 4630820 | 48422.4 |
| molybdate abc transporter permease subunit | EBF16_RS25645 | Not Available | Positive | 4630891 - 4631592 | 25302.0 |
| atp-binding cassette domain-containing protein | EBF16_RS25650 | Not Available | Positive | 4631582 - 4632229 | 22922.0 |
| molybdate abc transporter substrate-binding protein | EBF16_RS25655 | Not Available | Negative | 4632269 - 4633054 | 27463.2 |
| molybdopterin oxidoreductase family protein | EBF16_RS25660 | Not Available | Positive | 4633198 - 4634835 | 58677.1 |
| glycosyltransferase | EBF16_RS25665 | Not Available | Negative | 4635355 - 4636524 | 42328.6 |
| helix-turn-helix domain-containing protein | EBF16_RS25670 | Not Available | Negative | 4636582 - 4637145 | 20038.6 |
| duf6456 domain-containing protein | EBF16_RS25675 | Not Available | Positive | 4637246 - 4637704 | 16314.6 |
| nudix hydrolase | EBF16_RS25680 | Not Available | Negative | 4637827 - 4638369 | 19651.3 |
| tpm domain-containing protein | EBF16_RS25685 | Not Available | Negative | 4638366 - 4638992 | 23166.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
