Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit ii | EBF16_RS02490 | Not Available | Negative | 474288 - 475025 | 27334.4 |
| cytochrome-c oxidase, cbb3-type subunit i | EBF16_RS02495 | Not Available | Negative | 475039 - 476700 | 62228.8 |
| hypothetical protein | EBF16_RS02500 | Not Available | Negative | 476724 - 477023 | 10600.1 |
| oxygen-independent coproporphyrinogen iii oxidase | EBF16_RS02505 | Not Available | Positive | 477582 - 478895 | 48195.3 |
| crp/fnr family transcriptional regulator | EBF16_RS02510 | Not Available | Positive | 478986 - 479675 | 25322.5 |
| duf308 domain-containing protein | EBF16_RS02515 | Not Available | Positive | 479669 - 480283 | 22149.0 |
| atp-binding protein | EBF16_RS02520 | Not Available | Positive | 480623 - 481981 | 51813.1 |
| is21-like element helper atpase istb | EBF16_RS02525 | Not Available | Negative | 482061 - 482921 | 31570.6 |
| is21 family transposase | EBF16_RS02530 | Not Available | Negative | 482918 - 484180 | 47830.3 |
| atp-binding protein | EBF16_RS02535 | Not Available | Positive | 484331 - 484489 | 5820.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
