Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-export chaperone secb | EBF16_RS25490 | Not Available | Positive | 4600358 - 4600861 | 18140.5 |
| murein biosynthesis integral membrane protein murj | EBF16_RS25495 | Not Available | Positive | 4600931 - 4602505 | 55699.4 |
| tryptophan--trna ligase | EBF16_RS25500 | Not Available | Positive | 4602526 - 4603530 | 36471.8 |
| duf4136 domain-containing protein | EBF16_RS25505 | Not Available | Positive | 4603741 - 4604388 | 23104.3 |
| dicarboxylate/amino acid:cation symporter | EBF16_RS25510 | Not Available | Positive | 4604527 - 4605768 | 41980.8 |
| succinyl-diaminopimelate desuccinylase | EBF16_RS25515 | Not Available | Negative | 4606130 - 4607272 | 40019.7 |
| cupin domain-containing protein | EBF16_RS25520 | Not Available | Positive | 4607326 - 4607772 | 15688.4 |
| s66 peptidase family protein | EBF16_RS25525 | Not Available | Positive | 4607769 - 4608806 | 36285.8 |
| dipeptidase | EBF16_RS25530 | Not Available | Negative | 4608865 - 4610166 | 45735.7 |
| leucyl/phenylalanyl-trna--protein transferase | EBF16_RS25535 | Not Available | Positive | 4610248 - 4611000 | 26644.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
