Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-polyprenylphenol 6-hydroxylase | EBF16_RS25440 | Not Available | Negative | 4589679 - 4591220 | 56822.0 |
| class i sam-dependent methyltransferase | EBF16_RS25445 | Not Available | Negative | 4591228 - 4591959 | 27212.6 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | EBF16_RS25450 | Not Available | Positive | 4592140 - 4592952 | 29486.7 |
| 30s ribosomal protein s20 | EBF16_RS25455 | Not Available | Positive | 4593070 - 4593333 | 9325.53 |
| chromosomal replication initiator protein dnaa | EBF16_RS25460 | Not Available | Positive | 4593764 - 4595182 | 51831.5 |
| peptidylprolyl isomerase | EBF16_RS25465 | Not Available | Positive | 4595250 - 4595867 | 21470.8 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | EBF16_RS25470 | Not Available | Negative | 4595878 - 4597572 | 60884.6 |
| smr/muts family protein | EBF16_RS25475 | Not Available | Negative | 4597675 - 4598208 | 19171.4 |
| murein transglycosylase a | EBF16_RS25480 | Not Available | Negative | 4598218 - 4599483 | 43871.3 |
| tim44/tima family putative adaptor protein | EBF16_RS25485 | Not Available | Negative | 4599480 - 4600136 | 23712.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
