Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | EBF16_RS25390 | Not Available | Positive | 4581790 - 4582992 | 42769.0 |
| hypothetical protein | EBF16_RS25395 | Not Available | Positive | 4583303 - 4583464 | 5430.66 |
| peptide-methionine (s)-s-oxide reductase msra | EBF16_RS25400 | Not Available | Positive | 4583451 - 4584125 | 24602.5 |
| zinc-binding dehydrogenase | EBF16_RS25405 | Not Available | Positive | 4584216 - 4585334 | 39035.9 |
| gnat family n-acetyltransferase | EBF16_RS25410 | Not Available | Positive | 4585372 - 4585899 | 19041.8 |
| dsre/dsrf/drsh-like family protein | EBF16_RS25415 | Not Available | Negative | 4586429 - 4586770 | 11143.5 |
| hesa/moeb/thif family protein | EBF16_RS25420 | Not Available | Negative | 4586782 - 4587549 | 26438.3 |
| hypothetical protein | EBF16_RS25425 | Not Available | Negative | 4587546 - 4587950 | 14815.0 |
| dutp diphosphatase | EBF16_RS25430 | Not Available | Negative | 4587955 - 4588410 | 15861.2 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | EBF16_RS25435 | Not Available | Negative | 4588385 - 4589629 | 43536.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
