Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | EBF16_RS25340 | Not Available | Positive | 4569548 - 4570423 | 30396.2 |
| abc-f family atp-binding cassette domain-containing protein | EBF16_RS25345 | Not Available | Positive | 4570623 - 4572491 | 67774.0 |
| ai-2e family transporter | EBF16_RS25350 | Not Available | Negative | 4572514 - 4573608 | 39295.0 |
| ycei family protein | EBF16_RS25355 | Not Available | Negative | 4573658 - 4574902 | 42590.6 |
| alkaline phosphatase family protein | EBF16_RS25360 | Not Available | Negative | 4575006 - 4576346 | 46909.7 |
| tonb-dependent receptor | EBF16_RS25365 | Not Available | Negative | 4576348 - 4578615 | 81769.0 |
| acyl-coa thioesterase | EBF16_RS25370 | Not Available | Positive | 4578835 - 4579275 | 16643.7 |
| duf983 domain-containing protein | EBF16_RS25375 | Not Available | Negative | 4579290 - 4579676 | 13863.3 |
| aminodeoxychorismate synthase component i | EBF16_RS25380 | Not Available | Positive | 4579770 - 4580948 | 42207.8 |
| aminotransferase class iv | EBF16_RS25385 | Not Available | Positive | 4580981 - 4581604 | 23277.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
