Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase c-terminal domain-containing protein | EBF16_RS25140 | Not Available | Negative | 4525686 - 4527488 | 63942.5 |
| merr family transcriptional regulator | EBF16_RS25145 | Not Available | Negative | 4527546 - 4527953 | 15535.3 |
| nad(p)/fad-dependent oxidoreductase | EBF16_RS25150 | Not Available | Positive | 4528072 - 4529694 | 58777.2 |
| phosphoribosylglycinamide synthetase | EBF16_RS25155 | Not Available | Positive | 4529813 - 4530844 | 37734.4 |
| ntp transferase domain-containing protein | EBF16_RS25160 | Not Available | Positive | 4530844 - 4531650 | 28429.6 |
| sugar-transfer associated atp-grasp domain-containing protein | EBF16_RS25165 | Not Available | Positive | 4531654 - 4532745 | 38577.6 |
| glycosyltransferase | EBF16_RS25170 | Not Available | Positive | 4532742 - 4533839 | 38608.0 |
| helix-turn-helix domain-containing protein | EBF16_RS29685 | Not Available | Negative | 4533836 - 4533943 | 4004.66 |
| nucleoside hydrolase | EBF16_RS25180 | Not Available | Positive | 4534109 - 4535077 | 33703.1 |
| hypothetical protein | EBF16_RS29490 | Not Available | Negative | 4535074 - 4535295 | 7977.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
