Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | EBF16_RS29185 | Not Available | Positive | 467273 - 467359 | 2834.42 |
| atp-binding protein | EBF16_RS02450 | Not Available | Positive | 467572 - 468003 | 16181.7 |
| ompw/alkl family protein | EBF16_RS02455 | Not Available | Negative | 467995 - 468387 | 13223.0 |
| hypothetical protein | EBF16_RS28410 | Not Available | Positive | 468643 - 468870 | 8113.0 |
| cbb3-type cytochrome oxidase assembly protein ccos | EBF16_RS02460 | Not Available | Negative | 468917 - 469108 | 6948.22 |
| heavy metal translocating p-type atpase | EBF16_RS02465 | Not Available | Negative | 469105 - 471219 | 73032.8 |
| fixh family protein | EBF16_RS02470 | Not Available | Negative | 471216 - 471659 | 16405.0 |
| 4fe-4s dicluster domain-containing protein | EBF16_RS02475 | Not Available | Negative | 471656 - 473197 | 57250.3 |
| cytochrome-c oxidase, cbb3-type subunit iii | EBF16_RS02480 | Not Available | Negative | 473181 - 474143 | 34659.9 |
| cbb3-type cytochrome c oxidase subunit 3 | EBF16_RS02485 | Not Available | Negative | 474136 - 474291 | 5866.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
