Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, cytochrome b556 subunit | EBF16_RS25090 | Not Available | Positive | 4515734 - 4516129 | 14203.5 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | EBF16_RS25095 | Not Available | Positive | 4516129 - 4516518 | 14083.8 |
| succinate dehydrogenase flavoprotein subunit | EBF16_RS25100 | Not Available | Positive | 4516518 - 4518332 | 65944.1 |
| hypothetical protein | EBF16_RS25105 | Not Available | Positive | 4518457 - 4519083 | 22164.1 |
| hypothetical protein | EBF16_RS25110 | Not Available | Negative | 4519093 - 4519557 | 17751.5 |
| copper chaperone pcu(a)c | EBF16_RS25115 | Not Available | Negative | 4519554 - 4520039 | 16763.2 |
| molecular chaperone dnak | EBF16_RS25120 | Not Available | Positive | 4520217 - 4522115 | 67529.1 |
| molecular chaperone dnaj | EBF16_RS25125 | Not Available | Positive | 4522219 - 4523355 | 40399.6 |
| apc family permease | EBF16_RS25130 | Not Available | Negative | 4523374 - 4524672 | 44319.0 |
| duf3617 domain-containing protein | EBF16_RS25135 | Not Available | Positive | 4524795 - 4525679 | 32398.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
