Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2312 domain-containing protein | EBF16_RS25040 | Not Available | Negative | 4506363 - 4506605 | 9318.38 |
| duf1244 domain-containing protein | EBF16_RS25045 | Not Available | Negative | 4506784 - 4507083 | 10898.9 |
| pyruvate kinase | EBF16_RS25050 | Not Available | Positive | 4507188 - 4508660 | 52542.6 |
| type b 50s ribosomal protein l36 | EBF16_RS25055 | Not Available | Negative | 4508845 - 4508970 | 5038.27 |
| duf4136 domain-containing protein | EBF16_RS25060 | Not Available | Positive | 4509167 - 4509757 | 20258.1 |
| m14-type cytosolic carboxypeptidase | EBF16_RS25065 | Not Available | Positive | 4509754 - 4510884 | 41793.9 |
| amidase | EBF16_RS25070 | Not Available | Positive | 4510923 - 4512287 | 46939.7 |
| dienelactone hydrolase family protein | EBF16_RS25075 | Not Available | Negative | 4512284 - 4513003 | 25394.3 |
| 50s ribosomal protein l11 methyltransferase | EBF16_RS25080 | Not Available | Negative | 4513034 - 4514032 | 35247.2 |
| methyl-accepting chemotaxis protein | EBF16_RS25085 | Not Available | Negative | 4514230 - 4515561 | 47091.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
