Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna glutamyl-q(34) synthetase gluqrs | EBF16_RS24990 | Not Available | Negative | 4498476 - 4499381 | 32243.7 |
| hnh endonuclease | EBF16_RS24995 | Not Available | Positive | 4499475 - 4500041 | 21915.1 |
| crp/fnr family transcriptional regulator | EBF16_RS25000 | Not Available | Negative | 4500053 - 4500790 | 27654.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | EBF16_RS25005 | Not Available | Positive | 4500999 - 4502282 | 45007.8 |
| pas domain-containing protein | EBF16_RS25010 | Not Available | Positive | 4502275 - 4503792 | 55852.4 |
| response regulator | EBF16_RS25015 | Not Available | Negative | 4503737 - 4504174 | 14769.8 |
| duf2188 domain-containing protein | EBF16_RS25020 | Not Available | Negative | 4504244 - 4504543 | 10669.5 |
| crossover junction endodeoxyribonuclease ruvc | EBF16_RS25025 | Not Available | Negative | 4504500 - 4504991 | 17001.8 |
| yebc/pmpr family dna-binding transcriptional regulator | EBF16_RS25030 | Not Available | Negative | 4505076 - 4505819 | 26537.2 |
| heavy metal-binding domain-containing protein | EBF16_RS25035 | Not Available | Negative | 4505913 - 4506239 | 11468.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
