Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nupc/nupg family nucleoside cnt transporter | EBF16_RS24940 | Not Available | Positive | 4490193 - 4491506 | 45139.5 |
| duf1176 domain-containing protein | EBF16_RS24945 | Not Available | Positive | 4491628 - 4492629 | 35131.5 |
| had family hydrolase | EBF16_RS24950 | Not Available | Positive | 4492662 - 4493423 | 27168.0 |
| type ii toxin-antitoxin system rele/pare family toxin | EBF16_RS24955 | Not Available | Negative | 4493437 - 4493742 | 11410.8 |
| type ii toxin-antitoxin system pard family antitoxin | EBF16_RS24960 | Not Available | Negative | 4493739 - 4493987 | 8901.84 |
| l-histidine n(alpha)-methyltransferase | EBF16_RS24965 | Not Available | Negative | 4494346 - 4495302 | 34748.4 |
| ergothioneine biosynthesis protein egtb | EBF16_RS24970 | Not Available | Negative | 4495308 - 4496576 | 46966.4 |
| ggdef domain-containing protein | EBF16_RS24975 | Not Available | Negative | 4496670 - 4497524 | 31639.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EBF16_RS24980 | Not Available | Negative | 4497651 - 4498226 | 20208.1 |
| twin transmembrane helix small protein | EBF16_RS24985 | Not Available | Negative | 4498233 - 4498466 | 8325.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
