Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsba family protein | EBF16_RS24705 | Not Available | Negative | 4433756 - 4434523 | 26913.1 |
| m48 family metalloprotease | EBF16_RS24710 | Not Available | Negative | 4434520 - 4435866 | 48833.6 |
| rne/rng family ribonuclease | EBF16_RS24715 | Not Available | Negative | 4436016 - 4438754 | 100587.0 |
| n-acetylmuramoyl-l-alanine amidase | EBF16_RS24720 | Not Available | Positive | 4439274 - 4440554 | 45194.7 |
| penicillin-binding protein 1a | EBF16_RS24725 | Not Available | Positive | 4440691 - 4443225 | 93005.1 |
| hypothetical protein | EBF16_RS24730 | Not Available | Negative | 4443259 - 4443693 | 15928.3 |
| peptide chain release factor 2 | EBF16_RS24735 | Not Available | Positive | 4443922 - 4445049 | 41757.8 |
| class i sam-dependent methyltransferase | EBF16_RS24740 | Not Available | Positive | 4445049 - 4445774 | 26434.7 |
| sterol desaturase family protein | EBF16_RS24745 | Not Available | Negative | 4446186 - 4446704 | 19517.9 |
| torf family putative porin | EBF16_RS24750 | Not Available | Negative | 4446820 - 4447560 | 25643.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
