Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class v-fold plp-dependent enzyme | EBF16_RS24655 | Not Available | Positive | 4427320 - 4428558 | 44526.8 |
| doxx family protein | EBF16_RS24660 | Not Available | Negative | 4428562 - 4428939 | 13662.9 |
| pyridoxamine 5'-phosphate oxidase family protein | EBF16_RS24665 | Not Available | Negative | 4428957 - 4429391 | 16166.8 |
| 2'-5' rna ligase family protein | EBF16_RS24670 | Not Available | Positive | 4429512 - 4430063 | 20489.8 |
| alkylphosphonate utilization protein | EBF16_RS24675 | Not Available | Negative | 4430070 - 4430372 | 10757.7 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | EBF16_RS24680 | Not Available | Negative | 4430377 - 4431024 | 23551.4 |
| membrane protein insertase yidc | EBF16_RS24685 | Not Available | Negative | 4431066 - 4432772 | 63114.9 |
| membrane protein insertion efficiency factor yidd | EBF16_RS24690 | Not Available | Negative | 4432808 - 4433020 | 7747.64 |
| ribonuclease p protein component | EBF16_RS24695 | Not Available | Negative | 4433017 - 4433418 | 14475.0 |
| 50s ribosomal protein l34 | EBF16_RS24700 | Not Available | Negative | 4433451 - 4433585 | 5138.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
