Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exbd/tolr family protein | EBF16_RS24560 | Not Available | Positive | 4409067 - 4409555 | 17332.9 |
| exbd/tolr family protein | EBF16_RS24565 | Not Available | Positive | 4409580 - 4410002 | 15365.8 |
| pilz domain-containing protein | EBF16_RS24570 | Not Available | Positive | 4410182 - 4410505 | 12517.3 |
| abc transporter transmembrane domain-containing protein | EBF16_RS24575 | Not Available | Negative | 4410530 - 4412317 | 62866.3 |
| class i sam-dependent methyltransferase | EBF16_RS24580 | Not Available | Negative | 4412375 - 4413667 | 47082.1 |
| n-acetyl-d-glu racemase dgca | EBF16_RS24585 | Not Available | Positive | 4413771 - 4414745 | 33840.6 |
| hypothetical protein | EBF16_RS24590 | Not Available | Negative | 4415128 - 4415526 | 13769.8 |
| mechanosensitive ion channel family protein | EBF16_RS24595 | Not Available | Negative | 4415641 - 4416798 | 42059.5 |
| dna topoisomerase ib | EBF16_RS24600 | Not Available | Negative | 4416831 - 4417838 | 37483.7 |
| hypothetical protein | EBF16_RS24605 | Not Available | Negative | 4417917 - 4418630 | 25337.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
