Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hwe histidine kinase domain-containing protein | EBF16_RS24460 | Not Available | Positive | 4386040 - 4388604 | 92614.3 |
| doda-type extradiol aromatic ring-opening family dioxygenase | EBF16_RS24465 | Not Available | Positive | 4388670 - 4389479 | 29366.9 |
| (2fe-2s)-binding protein | EBF16_RS24470 | Not Available | Negative | 4389489 - 4390040 | 19580.4 |
| duf2721 domain-containing protein | EBF16_RS24475 | Not Available | Negative | 4390037 - 4390513 | 17293.5 |
| ll-diaminopimelate aminotransferase | EBF16_RS24480 | Not Available | Negative | 4390652 - 4391863 | 43840.6 |
| pha/phb synthase family protein | EBF16_RS24485 | Not Available | Positive | 4392007 - 4393746 | 64137.6 |
| phasin family protein | EBF16_RS24490 | Not Available | Positive | 4393887 - 4394750 | 29541.2 |
| atp-dependent clp protease adapter clps | EBF16_RS24495 | Not Available | Positive | 4394928 - 4395299 | 13996.7 |
| hypothetical protein | EBF16_RS24500 | Not Available | Positive | 4395444 - 4396049 | 20322.9 |
| glycerol-3-phosphate dehydrogenase | EBF16_RS24505 | Not Available | Positive | 4396193 - 4397701 | 55193.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
