Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | EBF16_RS24410 | Not Available | Positive | 4376329 - 4376673 | 12582.2 |
| gnat family n-acetyltransferase | EBF16_RS24415 | Not Available | Negative | 4376680 - 4377204 | 18986.8 |
| sixa phosphatase family protein | EBF16_RS24420 | Not Available | Negative | 4377207 - 4377749 | 20069.9 |
| atp-dependent dna helicase | EBF16_RS24425 | Not Available | Negative | 4377841 - 4380594 | 99178.7 |
| pilz domain-containing protein | EBF16_RS24430 | Not Available | Negative | 4380644 - 4381015 | 13422.2 |
| lysine--trna ligase | EBF16_RS24435 | Not Available | Positive | 4381147 - 4382727 | 58827.0 |
| rcnb family protein | EBF16_RS24440 | Not Available | Negative | 4382912 - 4383382 | 18856.2 |
| 2og-fe(ii) oxygenase | EBF16_RS24445 | Not Available | Negative | 4383556 - 4384233 | 25333.0 |
| rcnb family protein | EBF16_RS24450 | Not Available | Negative | 4384334 - 4385263 | 35969.2 |
| biliverdin-producing heme oxygenase | EBF16_RS24455 | Not Available | Positive | 4385562 - 4386047 | 17144.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
