Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter | EBF16_RS23820 | Not Available | Negative | 4261418 - 4262764 | 46334.0 |
| p-ii family nitrogen regulator | EBF16_RS23825 | Not Available | Negative | 4262778 - 4263116 | 11928.5 |
| duf924 family protein | EBF16_RS23830 | Not Available | Negative | 4263273 - 4263848 | 21213.7 |
| metalloprotease tldd | EBF16_RS23835 | Not Available | Negative | 4263936 - 4265378 | 50561.1 |
| zinc-finger domain-containing protein | EBF16_RS23840 | Not Available | Negative | 4265433 - 4265660 | 7901.36 |
| hypothetical protein | EBF16_RS23845 | Not Available | Negative | 4265715 - 4265894 | 6202.78 |
| Trna-val | Not Available | Not Available | Positive | 4266041 - 4266116 | Not Available |
| marr family transcriptional regulator | EBF16_RS23855 | Not Available | Negative | 4266185 - 4267174 | 35845.0 |
| d-amino-acid transaminase | EBF16_RS23860 | Not Available | Negative | 4267395 - 4268246 | 30169.4 |
| rna polymerase factor sigma-54 | EBF16_RS23865 | Not Available | Negative | 4268454 - 4269971 | 53832.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
