Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bestrophin family protein | EBF16_RS23720 | Not Available | Positive | 4240594 - 4241478 | 32859.2 |
| dicarboxylate/amino acid:cation symporter | EBF16_RS23725 | Not Available | Negative | 4241543 - 4242874 | 47413.1 |
| pyridoxamine 5'-phosphate oxidase | EBF16_RS23730 | Not Available | Negative | 4243054 - 4243629 | 22006.7 |
| dnaj c-terminal domain-containing protein | EBF16_RS23735 | Not Available | Positive | 4243766 - 4244686 | 31820.7 |
| yihy/virulence factor brkb family protein | EBF16_RS23740 | Not Available | Positive | 4244743 - 4245666 | 33464.2 |
| enoyl-acp reductase fabi | EBF16_RS23745 | Not Available | Positive | 4245663 - 4246469 | 28897.9 |
| chorismate synthase | EBF16_RS23750 | Not Available | Positive | 4246497 - 4247570 | 37726.6 |
| slc13 family permease | EBF16_RS23755 | Not Available | Positive | 4247833 - 4249614 | 62692.0 |
| phzf family phenazine biosynthesis protein | EBF16_RS23760 | Not Available | Positive | 4249694 - 4250479 | 28009.2 |
| serine hydrolase domain-containing protein | EBF16_RS23765 | Not Available | Negative | 4250476 - 4251600 | 40216.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
