Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extensin family protein | EBF16_RS23670 | Not Available | Negative | 4229880 - 4230578 | 24791.6 |
| phosphoserine transaminase | EBF16_RS23675 | Not Available | Positive | 4230739 - 4231899 | 41276.1 |
| phosphoglycerate dehydrogenase | EBF16_RS23680 | Not Available | Positive | 4232026 - 4233606 | 55648.3 |
| atp phosphoribosyltransferase regulatory subunit | EBF16_RS23685 | Not Available | Positive | 4233784 - 4234914 | 40133.0 |
| alpha/beta hydrolase | EBF16_RS23690 | Not Available | Negative | 4234908 - 4235768 | 30285.5 |
| adenylosuccinate synthase | EBF16_RS23695 | Not Available | Positive | 4235996 - 4237285 | 46231.1 |
| hypothetical protein | EBF16_RS23700 | Not Available | Positive | 4237291 - 4237473 | 6817.34 |
| family 43 glycosylhydrolase | EBF16_RS23705 | Not Available | Negative | 4237511 - 4238440 | 34181.3 |
| nadph-dependent fmn reductase | EBF16_RS23710 | Not Available | Positive | 4238596 - 4239165 | 20616.8 |
| dicarboxylate/amino acid:cation symporter | EBF16_RS23715 | Not Available | Negative | 4239128 - 4240456 | 46572.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
