Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1636 domain-containing protein | EBF16_RS23620 | Not Available | Positive | 4222161 - 4222568 | 14666.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | EBF16_RS23625 | Not Available | Positive | 4222565 - 4223578 | 34138.1 |
| histidine phosphatase family protein | EBF16_RS23630 | Not Available | Positive | 4223575 - 4224144 | 20361.5 |
| adenosylcobinamide-gdp ribazoletransferase | EBF16_RS23635 | Not Available | Positive | 4224141 - 4224860 | 25342.3 |
| threonine-phosphate decarboxylase | EBF16_RS23640 | Not Available | Positive | 4224857 - 4225840 | 34988.0 |
| adenosylcobinamide-phosphate synthase cbib | EBF16_RS23645 | Not Available | Positive | 4225833 - 4226786 | 34108.8 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | EBF16_RS23650 | Not Available | Positive | 4226783 - 4227289 | 17371.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EBF16_RS23655 | Not Available | Negative | 4227318 - 4228157 | 29604.5 |
| pyrimidine 5'-nucleotidase | EBF16_RS23660 | Not Available | Negative | 4228154 - 4228825 | 24924.6 |
| tigr00730 family rossman fold protein | EBF16_RS23665 | Not Available | Negative | 4228890 - 4229768 | 32903.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
