Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 4211489 - 4211563 | Not Available |
| tonb-dependent receptor plug domain-containing protein | EBF16_RS23580 | Not Available | Positive | 4211915 - 4213933 | 70999.4 |
| duf1294 domain-containing protein | EBF16_RS23585 | Not Available | Positive | 4213989 - 4214213 | 8509.82 |
| Trna-thr | Not Available | Not Available | Positive | 4214238 - 4214312 | Not Available |
| hypothetical protein | EBF16_RS28915 | Not Available | Positive | 4214428 - 4214568 | 5193.99 |
| aminopeptidase p family protein | EBF16_RS23595 | Not Available | Negative | 4214575 - 4216356 | 63962.5 |
| s9 family peptidase | EBF16_RS23600 | Not Available | Positive | 4216467 - 4218539 | 77175.2 |
| acyl-coa thioesterase | EBF16_RS23605 | Not Available | Positive | 4218539 - 4218937 | 14897.6 |
| abc transporter substrate-binding protein | EBF16_RS23610 | Not Available | Negative | 4218950 - 4219810 | 30334.0 |
| tonb-dependent receptor plug domain-containing protein | EBF16_RS23615 | Not Available | Positive | 4220206 - 4222161 | 70200.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
