Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate kinase | EBF16_RS23525 | Not Available | Positive | 4196203 - 4197120 | 31431.9 |
| sodium-translocating pyrophosphatase | EBF16_RS23530 | Not Available | Positive | 4197348 - 4199471 | 72436.1 |
| dna methyltransferase | EBF16_RS23535 | Not Available | Positive | 4199610 - 4201256 | 60302.2 |
| tonb-dependent siderophore receptor | EBF16_RS23540 | Not Available | Negative | 4201277 - 4203391 | 76451.9 |
| duf2490 domain-containing protein | EBF16_RS23545 | Not Available | Positive | 4203666 - 4204340 | 25577.3 |
| trbi/virb10 family protein | EBF16_RS23550 | Not Available | Positive | 4204528 - 4204803 | 9650.45 |
| efflux transporter outer membrane subunit | EBF16_RS23555 | Not Available | Negative | 4204796 - 4206226 | 49564.4 |
| is5/is1182 family transposase | EBF16_RS29485 | Not Available | Negative | 4206219 - 4209240 | 106672.0 |
| fecr family protein | EBF16_RS23565 | Not Available | Negative | 4209511 - 4210509 | 36553.1 |
| rna polymerase sigma factor | EBF16_RS23570 | Not Available | Negative | 4210506 - 4211108 | 22430.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
