Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | EBF16_RS23330 | Not Available | Negative | 4157011 - 4158537 | 57070.3 |
| urca family protein | EBF16_RS23335 | Not Available | Negative | 4158733 - 4159065 | 11333.6 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | EBF16_RS23340 | Not Available | Negative | 4159294 - 4160886 | 55699.3 |
| alpha/beta hydrolase family protein | EBF16_RS23345 | Not Available | Positive | 4161046 - 4162992 | 69421.9 |
| heparinase ii/iii family protein | EBF16_RS23350 | Not Available | Negative | 4163174 - 4164940 | 63476.4 |
| ribulose-phosphate 3-epimerase | EBF16_RS23355 | Not Available | Negative | 4164937 - 4165599 | 23546.6 |
| hypothetical protein | EBF16_RS23360 | Not Available | Negative | 4165672 - 4166157 | 17950.5 |
| rsmb/nop family class i sam-dependent rna methyltransferase | EBF16_RS23365 | Not Available | Negative | 4166209 - 4167519 | 46125.6 |
| hypothetical protein | EBF16_RS23370 | Not Available | Negative | 4167557 - 4167874 | 11415.2 |
| zinc metalloprotease htpx | EBF16_RS23375 | Not Available | Negative | 4167874 - 4168839 | 33699.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
