Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | EBF16_RS23280 | Not Available | Positive | 4147386 - 4148918 | 54024.9 |
| adenosine kinase | EBF16_RS23285 | Not Available | Negative | 4148984 - 4149982 | 35242.0 |
| ei24 domain-containing protein | EBF16_RS23290 | Not Available | Positive | 4150102 - 4150776 | 24134.4 |
| hypothetical protein | EBF16_RS23295 | Not Available | Positive | 4150776 - 4151144 | 12809.5 |
| trna epoxyqueuosine(34) reductase queg | EBF16_RS23300 | Not Available | Negative | 4151125 - 4152183 | 38097.6 |
| abc transporter atp-binding protein | EBF16_RS23305 | Not Available | Positive | 4152206 - 4153171 | 34449.6 |
| abc transporter permease | EBF16_RS23310 | Not Available | Positive | 4153168 - 4154358 | 42856.8 |
| peptide-methionine (r)-s-oxide reductase msrb | EBF16_RS23315 | Not Available | Positive | 4154377 - 4154853 | 17345.5 |
| hypothetical protein | EBF16_RS23320 | Not Available | Negative | 4154840 - 4156609 | 62785.1 |
| gtra family protein | EBF16_RS23325 | Not Available | Negative | 4156587 - 4157006 | 14488.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
