Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetyl-adp-ribose deacetylase | EBF16_RS23185 | Not Available | Positive | 4130225 - 4130761 | 18705.1 |
| helix-turn-helix transcriptional regulator | EBF16_RS23190 | Not Available | Negative | 4130853 - 4131044 | 7232.74 |
| hypothetical protein | EBF16_RS23195 | Not Available | Negative | 4131041 - 4131628 | 20774.4 |
| exbd/tolr family protein | EBF16_RS23200 | Not Available | Negative | 4131723 - 4132160 | 15850.4 |
| threonine--trna ligase | EBF16_RS23205 | Not Available | Positive | 4132331 - 4134313 | 74431.5 |
| translation initiation factor if-3 | EBF16_RS23210 | Not Available | Positive | 4134441 - 4134974 | 20221.7 |
| hypothetical protein | EBF16_RS28905 | Not Available | Negative | 4135201 - 4135389 | 6388.68 |
| inositol monophosphatase family protein | EBF16_RS23215 | Not Available | Negative | 4135361 - 4136188 | 29191.2 |
| voc family protein | EBF16_RS23220 | Not Available | Positive | 4136388 - 4136828 | 15850.5 |
| hypothetical protein | EBF16_RS23225 | Not Available | Positive | 4136877 - 4137113 | 8375.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
